Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm12085-201ENSMUST00000119263 940 ntBASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm27463-201ENSMUST00000183569 57 ntBASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6d-7A0A075B6B0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-7A0A075B6B0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-7A0A075B6B0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-7A0A075B6B0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6d-7A0A075B6B0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6d-7A0A075B6B0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm3375-201ENSMUST00000203929 796 ntBASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6d-7A0A075B6B0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm4974-201ENSMUST00000209974 875 ntBASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav6d-7A0A075B6B0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.75□□□□□ -0.37
Trav6d-7A0A075B6B0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms