Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav17A0A075B655 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.15□□□□□ -0.3
Trav17A0A075B655 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Gm27405-201ENSMUST00000184201 112 ntBASIC13.15□□□□□ -0.3
Trav17A0A075B655 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.15□□□□□ -0.3
Trav17A0A075B655 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav17A0A075B655 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.15□□□□□ -0.3
Trav17A0A075B655 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav17A0A075B655 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav17A0A075B655 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Trav17A0A075B655 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.15□□□□□ -0.31
Trav17A0A075B655 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav17A0A075B655 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Gm37292-201ENSMUST00000192062 758 ntBASIC13.14□□□□□ -0.31
Trav17A0A075B655 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav17A0A075B655 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.13□□□□□ -0.31
Trav17A0A075B655 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav17A0A075B655 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav17A0A075B655 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms