Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Mir8112-201ENSMUST00000184382 131 ntBASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Gm5522-201ENSMUST00000189483 1242 ntBASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Gm15820-201ENSMUST00000201566 728 ntBASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav3-4A0A075B654 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Golgb1-201ENSMUST00000023534 498 ntBASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav3-4A0A075B654 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-4A0A075B654 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-4A0A075B654 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-4A0A075B654 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-4A0A075B654 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.15□□□□□ -0.63
Trav3-4A0A075B654 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav3-4A0A075B654 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 AC125311.2-201ENSMUST00000227477 1940 ntBASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3-4A0A075B654 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms