Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Gm26524-201ENSMUST00000192339 390 ntBASIC12.81□□□□□ -0.36
Trav16A0A075B653 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav16A0A075B653 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.81□□□□□ -0.36
Trav16A0A075B653 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Rab3c-203ENSMUST00000224180 967 ntBASIC12.8□□□□□ -0.36
Trav16A0A075B653 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.8□□□□□ -0.36
Trav16A0A075B653 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Gm5874-201ENSMUST00000096101 508 ntBASIC12.8□□□□□ -0.36
Trav16A0A075B653 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.8□□□□□ -0.36
Trav16A0A075B653 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav16A0A075B653 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Gm5408-201ENSMUST00000197998 747 ntBASIC12.79□□□□□ -0.36
Trav16A0A075B653 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav16A0A075B653 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Gm15375-201ENSMUST00000119510 849 ntBASIC12.78□□□□□ -0.36
Trav16A0A075B653 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav16A0A075B653 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms