Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.08□□□□□ -0.47
Trav12-3A0A075B648 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12-3A0A075B648 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12-3A0A075B648 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.08□□□□□ -0.47
Trav12-3A0A075B648 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav12-3A0A075B648 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav12-3A0A075B648 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav12-3A0A075B648 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav12-3A0A075B648 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Trav12-3A0A075B648 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-3A0A075B648 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-3A0A075B648 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav12-3A0A075B648 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav12-3A0A075B648 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms