Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Gm11927-201ENSMUST00000118472 759 ntBASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav6n-5A0A075B621 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Gm5408-201ENSMUST00000197998 747 ntBASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Gm10138-203ENSMUST00000206952 366 ntBASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6n-5A0A075B621 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Gm7291-201ENSMUST00000199147 382 ntBASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6n-5A0A075B621 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6n-5A0A075B621 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms