Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav5-1A0A075B5Z7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav5-1A0A075B5Z7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav5-1A0A075B5Z7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav5-1A0A075B5Z7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Olfr129-201ENSMUST00000122318 993 ntBASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Rprl3-201ENSMUST00000157400 290 ntBASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav5-1A0A075B5Z7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms