Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv4A0A075B5I2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trbv4A0A075B5I2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trbv4A0A075B5I2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv4A0A075B5I2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv4A0A075B5I2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms