Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.86□□□□□ -1.47
RTP1P59025 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.86□□□□□ -1.47
RTP1P59025 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.86□□□□□ -1.47
RTP1P59025 OFD1P18Y-201ENST00000420889 959 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AL389915.1-201ENST00000422463 466 ntBASIC5.86□□□□□ -1.47
RTP1P59025 DDX39BP1-205ENST00000422507 192 ntBASIC5.86□□□□□ -1.47
RTP1P59025 MTND4LP10-201ENST00000435146 291 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.86□□□□□ -1.47
RTP1P59025 RHOT1P3-201ENST00000436571 331 ntBASIC5.86□□□□□ -1.47
RTP1P59025 MED28P3-201ENST00000444288 531 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC012512.1-201ENST00000446594 718 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.86□□□□□ -1.47
RTP1P59025 AL034418.1-201ENST00000448675 860 ntBASIC5.86□□□□□ -1.47
RTP1P59025 PDSS1P2-201ENST00000449397 678 ntBASIC5.86□□□□□ -1.47
RTP1P59025 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.86□□□□□ -1.47
RTP1P59025 AP000852.1-201ENST00000472460 573 ntBASIC5.86□□□□□ -1.47
RTP1P59025 RPL7P38-201ENST00000488396 739 ntBASIC5.86□□□□□ -1.47
RTP1P59025 SNX5P1-201ENST00000505757 1041 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.86□□□□□ -1.47
RTP1P59025 AC010342.1-201ENST00000514047 877 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.86□□□□□ -1.47
RTP1P59025 HMGN1P9-201ENST00000515212 298 ntBASIC5.86□□□□□ -1.47
RTP1P59025 RNU6-875P-201ENST00000516488 106 ntBASIC5.86□□□□□ -1.47
RTP1P59025 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.86□□□□□ -1.47
RTP1P59025 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.86□□□□□ -1.47
RTP1P59025 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.86□□□□□ -1.47
RTP1P59025 AP002748.2-201ENST00000528671 348 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.86□□□□□ -1.47
RTP1P59025 AC087276.1-201ENST00000529659 480 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AP006289.1-201ENST00000538089 277 ntBASIC5.86□□□□□ -1.47
RTP1P59025 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
RTP1P59025 HMGN2P47-201ENST00000559378 272 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.86□□□□□ -1.47
RTP1P59025 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 AC127024.5-201ENST00000580085 462 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC5.86□□□□□ -1.47
RTP1P59025 BNIP3P9-201ENST00000603714 553 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AL162431.4-201ENST00000604674 411 ntBASIC5.86□□□□□ -1.47
RTP1P59025 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.86□□□□□ -1.47
RTP1P59025 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RTP1P59025 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.86□□□□□ -1.47
RTP1P59025 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RTP1P59025 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.85□□□□□ -1.47
RTP1P59025 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.85□□□□□ -1.47
RTP1P59025 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.85□□□□□ -1.47
RTP1P59025 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RTP1P59025 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 CBX3P1-201ENST00000325243 554 ntBASIC5.85□□□□□ -1.47
RTP1P59025 Y_RNA.38-201ENST00000362617 102 ntBASIC5.85□□□□□ -1.47
RTP1P59025 RN7SKP153-201ENST00000365026 316 ntBASIC5.85□□□□□ -1.47
RTP1P59025 Y_RNA.372-201ENST00000365599 102 ntBASIC5.85□□□□□ -1.47
RTP1P59025 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 RNA5SP187-201ENST00000384400 119 ntBASIC5.85□□□□□ -1.47
RTP1P59025 SNORA40.3-201ENST00000390964 122 ntBASIC5.85□□□□□ -1.47
RTP1P59025 FCF1P10-201ENST00000407590 479 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.85□□□□□ -1.47
RTP1P59025 RPL7AP49-201ENST00000429522 581 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AC068287.1-201ENST00000430283 295 ntBASIC5.85□□□□□ -1.47
RTP1P59025 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.85□□□□□ -1.47
RTP1P59025 AL591438.1-201ENST00000433508 581 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.85□□□□□ -1.47
RTP1P59025 OR7E125P-201ENST00000443450 846 ntBASIC5.85□□□□□ -1.47
RTP1P59025 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RTP1P59025 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 DPPA3P1-201ENST00000448050 469 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AC090804.1-201ENST00000448870 490 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 AL513533.1-201ENST00000453728 415 ntBASIC5.85□□□□□ -1.47
RTP1P59025 BX248409.1-201ENST00000455497 255 ntBASIC5.85□□□□□ -1.47
RTP1P59025 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 AC022133.1-201ENST00000490961 571 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AC079382.1-201ENST00000493346 557 ntBASIC5.85□□□□□ -1.47
RTP1P59025 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.85□□□□□ -1.47
RTP1P59025 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.85□□□□□ -1.47
RTP1P59025 STMN1P2-201ENST00000508435 439 ntBASIC5.85□□□□□ -1.47
RTP1P59025 RPL7L1P13-201ENST00000511702 739 ntBASIC5.85□□□□□ -1.47
RTP1P59025 MTCYBP43-201ENST00000513621 740 ntBASIC5.85□□□□□ -1.47
RTP1P59025 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 RNY4P37-201ENST00000516225 96 ntBASIC5.85□□□□□ -1.47
RTP1P59025 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RTP1P59025 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.85□□□□□ -1.47
RTP1P59025 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms