Protein–RNA interactions for Protein: P31274

HOXC9, Homeobox protein Hox-C9, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9P31274 AC007823.1-201ENST00000569932 1566 ntBASIC4.99□□□□□ -1.61
HOXC9P31274 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC9P31274 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HOXC9P31274 AC008432.1-201ENST00000615912 1320 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AC093775.1-201ENST00000624154 1868 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC9P31274 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC9P31274 AC073346.2-201ENST00000624724 2058 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC9P31274 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
HOXC9P31274 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
HOXC9P31274 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC9P31274 SNORD9-201ENST00000362566 104 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC9P31274 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HOXC9P31274 RNU6-354P-201ENST00000383862 107 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 RNU6-610P-201ENST00000384264 107 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 MIR491-201ENST00000384877 84 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 RPL22P22-201ENST00000395439 379 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 KRR1P1-201ENST00000419430 803 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 FO393414.1-201ENST00000428697 1184 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC9P31274 AC011242.1-201ENST00000433596 1158 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC9P31274 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC9P31274 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC9P31274 TPT1P8-201ENST00000510120 555 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC9P31274 RPS27AP18-201ENST00000515536 459 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC9P31274 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXC9P31274 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC9P31274 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC9P31274 AP000916.1-201ENST00000533869 835 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC9P31274 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC9P31274 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HOXC9P31274 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC9P31274 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.98□□□□□ -1.61
HOXC9P31274 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.98□□□□□ -1.61
HOXC9P31274 ELOCP35-201ENST00000604289 336 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AC021851.1-201ENST00000608537 1082 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AL669942.2-201ENST00000620352 697 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AC010608.3-201ENST00000625048 527 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 AC055839.1-201ENST00000634467 498 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXC9P31274 AC119674.1-212ENST00000641155 993 ntBASIC4.98□□□□□ -1.61
HOXC9P31274 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC9P31274 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXC9P31274 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.98□□□□□ -1.61
HOXC9P31274 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC9P31274 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC9P31274 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC9P31274 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC9P31274 AP001273.1-201ENST00000624493 3152 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC9P31274 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC9P31274 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC9P31274 MIR142-201ENST00000384835 87 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 RPL5P19-201ENST00000404228 893 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC9P31274 DPY19L1P2-201ENST00000426647 915 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 FO393419.3-201ENST00000428741 282 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC9P31274 AC022022.1-201ENST00000430304 178 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AC011742.1-201ENST00000431448 434 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC9P31274 AL645638.1-201ENST00000440519 361 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC9P31274 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC9P31274 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXC9P31274 RPL21P47-201ENST00000483696 477 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AL358832.1-201ENST00000497800 389 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.97□□□□□ -1.61
HOXC9P31274 SNORA74D-201ENST00000516404 141 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC9P31274 OR7E13P-201ENST00000526052 910 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC9P31274 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC9P31274 AC090666.1-201ENST00000578241 445 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXC9P31274 AC012254.4-201ENST00000588843 273 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.97□□□□□ -1.61
HOXC9P31274 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXC9P31274 AL049844.2-201ENST00000604280 628 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AC012603.1-201ENST00000606424 528 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AL442067.2-201ENST00000614033 363 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC9P31274 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXC9P31274 UBE3AP2-201ENST00000429033 2259 ntBASIC4.97□□□□□ -1.61
HOXC9P31274 AC011266.1-201ENST00000624119 3569 ntBASIC4.96□□□□□ -1.61
HOXC9P31274 AC006484.1-201ENST00000435086 1884 ntBASIC4.96□□□□□ -1.61
HOXC9P31274 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HOXC9P31274 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC9P31274 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
HOXC9P31274 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HOXC9P31274 MIR122-201ENST00000385044 85 ntBASIC4.96□□□□□ -1.62
HOXC9P31274 AL355615.1-201ENST00000406187 641 ntBASIC4.96□□□□□ -1.62
HOXC9P31274 AC008173.1-201ENST00000418901 264 ntBASIC4.96□□□□□ -1.62
HOXC9P31274 AL035458.1-201ENST00000433096 585 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms