Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL021707.7-201ENST00000607991 416 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC090425.2-201ENST00000608818 501 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AP000346.3-201ENST00000622821 210 ntBASIC3.26□□□□□ -1.89
CCDC58Q4VC31 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
CCDC58Q4VC31 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 RNA5SP235-201ENST00000365411 114 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 CYB5AP4-201ENST00000396692 399 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 OR8G2P-201ENST00000412796 908 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 RPS27AP12-201ENST00000429552 465 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AL353705.1-201ENST00000433468 480 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 RPS4XP2-201ENST00000458402 793 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC012181.1-201ENST00000479895 423 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC006483.1-201ENST00000487308 313 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 RNU6-579P-201ENST00000516879 102 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC091488.1-201ENST00000604239 660 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC096586.2-201ENST00000610260 441 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC019176.2-201ENST00000611579 315 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AL732618.1-201ENST00000623251 301 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC090506.2-201ENST00000624521 419 ntBASIC3.25□□□□□ -1.89
CCDC58Q4VC31 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC58Q4VC31 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 MIR30E-201ENST00000362104 92 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 SNORA58B-201ENST00000364259 136 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 OR6C69P-201ENST00000394268 893 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC009480.2-201ENST00000422916 432 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC245028.1-201ENST00000423259 256 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 RPL7P46-201ENST00000425129 740 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC010618.1-201ENST00000469924 477 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 RN7SL283P-201ENST00000489055 303 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 FCF1P3-201ENST00000496394 590 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 OR7E13P-201ENST00000526052 910 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC009643.1-201ENST00000532030 391 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 TRAV15-201ENST00000556680 249 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 MIR4277-201ENST00000578298 84 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 LLPHP1-201ENST00000603571 367 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AP003117.2-201ENST00000606010 545 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AC092184.1-201ENST00000625042 715 ntBASIC3.24□□□□□ -1.89
CCDC58Q4VC31 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC58Q4VC31 AL355578.1-201ENST00000607405 1328 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 SKINT1L-201ENST00000401057 817 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AL583834.1-201ENST00000406943 343 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 TRGV6-201ENST00000417928 299 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC074367.1-201ENST00000438685 1125 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AL662791.1-201ENST00000441992 928 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 NUTF2P3-201ENST00000448540 384 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC104308.1-201ENST00000454621 333 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC007686.1-201ENST00000488511 463 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC078918.1-201ENST00000498515 228 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC020893.1-201ENST00000502452 580 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 RNU2-27P-201ENST00000516185 142 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC022695.1-201ENST00000522089 237 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AP006245.1-201ENST00000522549 120 ntBASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC58Q4VC31 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms