Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 MAPRE1P3-201ENST00000435438 796 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 AL121877.1-201ENST00000453704 622 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 CCDC75P1-201ENST00000469247 791 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL12P48061 OR52A4P-203ENST00000498233 1014 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 FTH1P24-201ENST00000503502 462 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL12P48061 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 VTA1P2-201ENST00000520205 911 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL12P48061 AC022784.5-201ENST00000522241 437 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL12P48061 AC008011.1-201ENST00000545989 227 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 AC090877.1-201ENST00000561418 344 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 AC027281.1-201ENST00000574178 758 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.63□□□□□ -1.83
CXCL12P48061 BNIP3P7-201ENST00000605641 516 ntBASIC3.63□□□□□ -1.83
CXCL12P48061 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.63□□□□□ -1.83
CXCL12P48061 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.63□□□□□ -1.83
CXCL12P48061 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CXCL12P48061 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CXCL12P48061 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CXCL12P48061 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CXCL12P48061 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL12P48061 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
CXCL12P48061 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL12P48061 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL12P48061 RNU6-670P-201ENST00000364312 104 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CXCL12P48061 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL12P48061 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL12P48061 OR2X1P-201ENST00000421144 687 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 OR5AW1P-201ENST00000426334 1006 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL12P48061 HIGD1AP12-201ENST00000427832 281 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 AL392003.1-201ENST00000434394 243 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 AC096638.2-201ENST00000434965 711 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 AC099063.2-201ENST00000446360 662 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 RAD1P2-201ENST00000446414 663 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL12P48061 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL12P48061 AC023141.12-201ENST00000512399 199 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL12P48061 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL12P48061 AC090281.1-201ENST00000523019 276 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL12P48061 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.62□□□□□ -1.83
CXCL12P48061 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.62□□□□□ -1.83
CXCL12P48061 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.62□□□□□ -1.83
CXCL12P48061 MIR6852-201ENST00000621699 66 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.62□□□□□ -1.83
CXCL12P48061 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CXCL12P48061 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CXCL12P48061 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL12P48061 AC097504.1-201ENST00000515103 2415 ntBASIC3.62□□□□□ -1.83
CXCL12P48061 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL12P48061 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CXCL12P48061 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CXCL12P48061 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL12P48061 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CXCL12P48061 AC068254.2-201ENST00000623938 3577 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL12P48061 MTCO1P8-201ENST00000416914 1523 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.61□□□□□ -1.83
CXCL12P48061 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CXCL12P48061 TAF9BP1-201ENST00000396646 746 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 DHFRP5-201ENST00000406944 564 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AL160275.2-201ENST00000412010 394 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AL645931.1-201ENST00000439737 410 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 XKRYP6-201ENST00000440468 1116 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 XKRYP3-201ENST00000442113 1116 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AC022431.1-201ENST00000450941 438 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 RNU6-775P-201ENST00000459318 96 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 RPL23AP12-201ENST00000467573 473 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 RPL31P61-201ENST00000496160 376 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 ATG10-AS1-201ENST00000504846 648 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 RNU6-319P-201ENST00000516025 108 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 RNU6-751P-201ENST00000516382 101 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 SEC11B-201ENST00000518383 499 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 OR5M7P-201ENST00000526140 972 ntBASIC3.61□□□□□ -1.83
CXCL12P48061 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.61□□□□□ -1.83
CXCL12P48061 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.61□□□□□ -1.83
CXCL12P48061 AC068446.3-201ENST00000555285 382 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms