Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
TNFP01375 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.41□□□□□ -1.86
TNFP01375 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFP01375 AL133457.1-201ENST00000564251 987 ntBASIC3.41□□□□□ -1.86
TNFP01375 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFP01375 MIR5195-201ENST00000583555 115 ntBASIC3.41□□□□□ -1.86
TNFP01375 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.41□□□□□ -1.86
TNFP01375 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.41□□□□□ -1.86
TNFP01375 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 AC006557.5-201ENST00000603126 811 ntBASIC3.41□□□□□ -1.86
TNFP01375 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 MIR8058-201ENST00000615737 89 ntBASIC3.41□□□□□ -1.86
TNFP01375 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TNFP01375 Z73965.1-201ENST00000623412 2297 ntBASIC3.41□□□□□ -1.86
TNFP01375 FAM35DP-201ENST00000323387 2712 ntBASIC3.41□□□□□ -1.86
TNFP01375 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TNFP01375 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TNFP01375 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TNFP01375 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TNFP01375 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TNFP01375 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
TNFP01375 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TNFP01375 RNA5SP42-201ENST00000364278 115 ntBASIC3.4□□□□□ -1.87
TNFP01375 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TNFP01375 MIR491-201ENST00000384877 84 ntBASIC3.4□□□□□ -1.87
TNFP01375 U3.19-201ENST00000390893 196 ntBASIC3.4□□□□□ -1.87
TNFP01375 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFP01375 AL138878.1-201ENST00000405131 347 ntBASIC3.4□□□□□ -1.87
TNFP01375 RN7SKP111-201ENST00000410349 271 ntBASIC3.4□□□□□ -1.87
TNFP01375 RNA5SP120-201ENST00000410900 112 ntBASIC3.4□□□□□ -1.87
TNFP01375 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.4□□□□□ -1.87
TNFP01375 CYP4F29P-201ENST00000420685 446 ntBASIC3.4□□□□□ -1.87
TNFP01375 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFP01375 RPS26P47-201ENST00000427219 348 ntBASIC3.4□□□□□ -1.87
TNFP01375 MTCO1P51-201ENST00000427672 1060 ntBASIC3.4□□□□□ -1.87
TNFP01375 IFNNP1-201ENST00000429219 553 ntBASIC3.4□□□□□ -1.87
TNFP01375 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFP01375 PPIAP17-201ENST00000438507 471 ntBASIC3.4□□□□□ -1.87
TNFP01375 AC099063.2-201ENST00000446360 662 ntBASIC3.4□□□□□ -1.87
TNFP01375 snoU13.24-201ENST00000458998 104 ntBASIC3.4□□□□□ -1.87
TNFP01375 AC008155.2-201ENST00000464337 397 ntBASIC3.4□□□□□ -1.87
TNFP01375 RN7SL807P-201ENST00000470923 297 ntBASIC3.4□□□□□ -1.87
TNFP01375 S100A11P1-201ENST00000477525 312 ntBASIC3.4□□□□□ -1.87
TNFP01375 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFP01375 AC112184.1-201ENST00000505179 312 ntBASIC3.4□□□□□ -1.87
TNFP01375 AC026427.2-201ENST00000506228 536 ntBASIC3.4□□□□□ -1.87
TNFP01375 FCF1P8-201ENST00000510322 597 ntBASIC3.4□□□□□ -1.87
TNFP01375 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFP01375 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFP01375 AC008489.1-201ENST00000524271 483 ntBASIC3.4□□□□□ -1.87
TNFP01375 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFP01375 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.4□□□□□ -1.87
TNFP01375 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFP01375 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFP01375 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFP01375 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFP01375 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.4□□□□□ -1.87
TNFP01375 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TNFP01375 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
TNFP01375 AC007390.2-201ENST00000606229 3803 ntBASIC3.4□□□□□ -1.87
TNFP01375 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFP01375 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TNFP01375 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TNFP01375 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
TNFP01375 RN7SKP44-201ENST00000363602 316 ntBASIC3.39□□□□□ -1.87
TNFP01375 RNA5SP235-201ENST00000365411 114 ntBASIC3.39□□□□□ -1.87
TNFP01375 OR6K3-202ENST00000368146 996 ntBASIC3.39□□□□□ -1.87
TNFP01375 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 BX323014.1-201ENST00000412876 237 ntBASIC3.39□□□□□ -1.87
TNFP01375 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFP01375 RPL21P110-201ENST00000433345 446 ntBASIC3.39□□□□□ -1.87
TNFP01375 BTG3P1-201ENST00000435859 716 ntBASIC3.39□□□□□ -1.87
TNFP01375 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFP01375 AC084357.1-201ENST00000473404 255 ntBASIC3.39□□□□□ -1.87
TNFP01375 HMGB3P14-201ENST00000494195 599 ntBASIC3.39□□□□□ -1.87
TNFP01375 AC093663.1-201ENST00000497190 394 ntBASIC3.39□□□□□ -1.87
TNFP01375 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.39□□□□□ -1.87
TNFP01375 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.39□□□□□ -1.87
TNFP01375 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFP01375 snoU109.6-201ENST00000516831 118 ntBASIC3.39□□□□□ -1.87
TNFP01375 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFP01375 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFP01375 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 CBX3P5-201ENST00000552017 521 ntBASIC3.39□□□□□ -1.87
TNFP01375 DUXAP6-201ENST00000553858 601 ntBASIC3.39□□□□□ -1.87
TNFP01375 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.39□□□□□ -1.87
TNFP01375 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 AC015911.5-201ENST00000587076 451 ntBASIC3.39□□□□□ -1.87
TNFP01375 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 AC015802.5-201ENST00000607478 399 ntBASIC3.39□□□□□ -1.87
TNFP01375 OR6R2P-201ENST00000609216 300 ntBASIC3.39□□□□□ -1.87
TNFP01375 AL442067.2-201ENST00000614033 363 ntBASIC3.39□□□□□ -1.87
TNFP01375 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms