Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 FTLP8-201ENST00000446770 267 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 AC016027.4-201ENST00000450866 277 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 MTND1P12-201ENST00000455231 147 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 AC025465.4-201ENST00000513422 638 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 ATP5LP3-201ENST00000514223 304 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 RNA5SP438-201ENST00000516561 112 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 RNU6-445P-201ENST00000516949 107 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 OR4R3P-201ENST00000525084 838 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 AC007494.1-201ENST00000562293 760 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC107954.1-201ENST00000565906 727 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC099489.2-201ENST00000574976 260 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 MIR3189-201ENST00000578735 73 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 SNORD95-201ENST00000579879 68 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 FGF7P1-201ENST00000582820 288 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC12P31275 BNIP3P9-201ENST00000603714 553 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 AC141002.1-201ENST00000607025 279 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 AC123768.4-201ENST00000616244 701 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HOXC12P31275 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 AP000756.2-201ENST00000624168 2567 ntBASIC5.35□□□□□ -1.55
HOXC12P31275 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
HOXC12P31275 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC12P31275 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC12P31275 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC12P31275 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC12P31275 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC12P31275 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC12P31275 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC12P31275 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
HOXC12P31275 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HOXC12P31275 RNU6-730P-201ENST00000383954 104 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 RNU6-1226P-201ENST00000384317 107 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC245096.1-201ENST00000413104 546 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 AL590609.2-201ENST00000421430 368 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 RPL7P57-201ENST00000423238 740 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC012498.1-201ENST00000424037 437 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC12P31275 AC104837.2-201ENST00000427236 424 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 CYCSP12-201ENST00000437729 300 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC12P31275 USP9YP8-201ENST00000441913 500 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AL445466.1-201ENST00000448432 357 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC112187.1-201ENST00000455837 479 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 PLGLA-201ENST00000465668 449 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC090602.1-201ENST00000469695 252 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AL136126.1-201ENST00000473603 402 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC023194.1-201ENST00000493084 308 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 FTH1P24-201ENST00000503502 462 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC12P31275 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC12P31275 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 AL512310.1-201ENST00000548639 172 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC12P31275 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC12P31275 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 AL391646.1-201ENST00000603860 190 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC055876.5-201ENST00000605667 259 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC008945.2-201ENST00000606056 604 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 AC009159.1-201ENST00000618386 642 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.34□□□□□ -1.55
HOXC12P31275 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HOXC12P31275 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HOXC12P31275 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC12P31275 AC092125.1-201ENST00000562568 1995 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms