Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.44□□□□□ -1.7
VCPP55072 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VCPP55072 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VCPP55072 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VCPP55072 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VCPP55072 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VCPP55072 CCNB2P1-201ENST00000399411 1150 ntBASIC4.44□□□□□ -1.7
VCPP55072 RN7SKP235-201ENST00000410662 305 ntBASIC4.44□□□□□ -1.7
VCPP55072 RNA5SP498-201ENST00000411342 120 ntBASIC4.44□□□□□ -1.7
VCPP55072 Z92545.1-201ENST00000411782 234 ntBASIC4.44□□□□□ -1.7
VCPP55072 HSFY1P1-201ENST00000423928 1178 ntBASIC4.44□□□□□ -1.7
VCPP55072 AL157831.1-201ENST00000426134 473 ntBASIC4.44□□□□□ -1.7
VCPP55072 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 MTND4LP14-201ENST00000429447 288 ntBASIC4.44□□□□□ -1.7
VCPP55072 MTCYBP12-201ENST00000440559 1134 ntBASIC4.44□□□□□ -1.7
VCPP55072 AC245517.2-201ENST00000442890 346 ntBASIC4.44□□□□□ -1.7
VCPP55072 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 RPS15AP29-201ENST00000445539 400 ntBASIC4.44□□□□□ -1.7
VCPP55072 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 AC104978.1-201ENST00000449387 391 ntBASIC4.44□□□□□ -1.7
VCPP55072 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 MTND5P8-201ENST00000449817 1083 ntBASIC4.44□□□□□ -1.7
VCPP55072 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.44□□□□□ -1.7
VCPP55072 ACTR3P3-201ENST00000480448 893 ntBASIC4.44□□□□□ -1.7
VCPP55072 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 AC018797.3-201ENST00000513388 1241 ntBASIC4.44□□□□□ -1.7
VCPP55072 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.44□□□□□ -1.7
VCPP55072 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.44□□□□□ -1.7
VCPP55072 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.44□□□□□ -1.7
VCPP55072 ZNF415P1-201ENST00000582279 1166 ntBASIC4.44□□□□□ -1.7
VCPP55072 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.44□□□□□ -1.7
VCPP55072 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.44□□□□□ -1.7
VCPP55072 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.44□□□□□ -1.7
VCPP55072 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VCPP55072 AC243654.2-201ENST00000612843 443 ntBASIC4.44□□□□□ -1.7
VCPP55072 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VCPP55072 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.44□□□□□ -1.7
VCPP55072 AC009452.1-201ENST00000640823 606 ntBASIC4.44□□□□□ -1.7
VCPP55072 AC009093.8-201ENST00000641769 292 ntBASIC4.44□□□□□ -1.7
VCPP55072 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.44□□□□□ -1.7
VCPP55072 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VCPP55072 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VCPP55072 AC073346.2-201ENST00000624724 2058 ntBASIC4.44□□□□□ -1.7
VCPP55072 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VCPP55072 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VCPP55072 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VCPP55072 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.43□□□□□ -1.7
VCPP55072 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.43□□□□□ -1.7
VCPP55072 RNU1-14P-201ENST00000362759 152 ntBASIC4.43□□□□□ -1.7
VCPP55072 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VCPP55072 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.43□□□□□ -1.7
VCPP55072 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 AC092647.1-201ENST00000420654 287 ntBASIC4.43□□□□□ -1.7
VCPP55072 EIF1P3-201ENST00000423841 334 ntBASIC4.43□□□□□ -1.7
VCPP55072 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 MTCO3P43-201ENST00000440974 771 ntBASIC4.43□□□□□ -1.7
VCPP55072 AC104306.1-201ENST00000449702 371 ntBASIC4.43□□□□□ -1.7
VCPP55072 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.43□□□□□ -1.7
VCPP55072 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.43□□□□□ -1.7
VCPP55072 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.43□□□□□ -1.7
VCPP55072 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.43□□□□□ -1.7
VCPP55072 AC010374.1-201ENST00000503762 1237 ntBASIC4.43□□□□□ -1.7
VCPP55072 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 RPL21P12-201ENST00000559810 515 ntBASIC4.43□□□□□ -1.7
VCPP55072 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.43□□□□□ -1.7
VCPP55072 AC037471.2-201ENST00000564941 598 ntBASIC4.43□□□□□ -1.7
VCPP55072 MIR4458-201ENST00000578872 75 ntBASIC4.43□□□□□ -1.7
VCPP55072 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 AC022146.1-201ENST00000595307 847 ntBASIC4.43□□□□□ -1.7
VCPP55072 AC004825.2-201ENST00000616634 455 ntBASIC4.43□□□□□ -1.7
VCPP55072 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.43□□□□□ -1.7
VCPP55072 AL163152.1-201ENST00000642001 374 ntBASIC4.43□□□□□ -1.7
VCPP55072 OR5AC4P-202ENST00000642086 985 ntBASIC4.43□□□□□ -1.7
VCPP55072 AL118496.1-201ENST00000440201 1812 ntBASIC4.43□□□□□ -1.7
VCPP55072 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.43□□□□□ -1.7
VCPP55072 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.43□□□□□ -1.7
VCPP55072 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VCPP55072 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
VCPP55072 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VCPP55072 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
VCPP55072 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.42□□□□□ -1.7
VCPP55072 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.42□□□□□ -1.7
VCPP55072 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.42□□□□□ -1.7
VCPP55072 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VCPP55072 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VCPP55072 RNA5SP502-201ENST00000362694 119 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms