Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RPL7P9-201ENST00000468715 747 ntBASIC3.37□□□□□ -1.87
CD74P04233 RN7SL481P-201ENST00000477764 299 ntBASIC3.37□□□□□ -1.87
CD74P04233 RPL21P103-201ENST00000479921 488 ntBASIC3.37□□□□□ -1.87
CD74P04233 AF213884.1-201ENST00000488102 463 ntBASIC3.37□□□□□ -1.87
CD74P04233 RPL35P6-201ENST00000490024 372 ntBASIC3.37□□□□□ -1.87
CD74P04233 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.37□□□□□ -1.87
CD74P04233 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.37□□□□□ -1.87
CD74P04233 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.37□□□□□ -1.87
CD74P04233 AC034244.2-201ENST00000514668 858 ntBASIC3.37□□□□□ -1.87
CD74P04233 RNU6-491P-201ENST00000516099 110 ntBASIC3.37□□□□□ -1.87
CD74P04233 RNA5SP49-201ENST00000516450 115 ntBASIC3.37□□□□□ -1.87
CD74P04233 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.37□□□□□ -1.87
CD74P04233 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CD74P04233 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
CD74P04233 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.37□□□□□ -1.87
CD74P04233 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.37□□□□□ -1.87
CD74P04233 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.37□□□□□ -1.87
CD74P04233 AC099489.2-201ENST00000574976 260 ntBASIC3.37□□□□□ -1.87
CD74P04233 AC069366.1-201ENST00000583159 838 ntBASIC3.37□□□□□ -1.87
CD74P04233 MIR5684-201ENST00000585074 65 ntBASIC3.37□□□□□ -1.87
CD74P04233 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.37□□□□□ -1.87
CD74P04233 AC008745.1-201ENST00000604064 271 ntBASIC3.37□□□□□ -1.87
CD74P04233 RNA5SP108-201ENST00000605921 117 ntBASIC3.37□□□□□ -1.87
CD74P04233 AC005021.1-201ENST00000608730 355 ntBASIC3.37□□□□□ -1.87
CD74P04233 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.37□□□□□ -1.87
CD74P04233 MIR378J-201ENST00000611988 109 ntBASIC3.37□□□□□ -1.87
CD74P04233 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.37□□□□□ -1.87
CD74P04233 AC104820.1-201ENST00000624183 307 ntBASIC3.37□□□□□ -1.87
CD74P04233 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.37□□□□□ -1.87
CD74P04233 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CD74P04233 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CD74P04233 AC026951.1-201ENST00000559530 2459 ntBASIC3.37□□□□□ -1.87
CD74P04233 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.37□□□□□ -1.87
CD74P04233 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD74P04233 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD74P04233 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CD74P04233 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CD74P04233 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.36□□□□□ -1.87
CD74P04233 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CD74P04233 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CD74P04233 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CD74P04233 OR4K15-201ENST00000305051 1216 ntBASIC3.36□□□□□ -1.87
CD74P04233 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CD74P04233 SNORD6-201ENST00000365444 73 ntBASIC3.36□□□□□ -1.87
CD74P04233 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CD74P04233 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.36□□□□□ -1.87
CD74P04233 HSPE1P8-201ENST00000406997 288 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.36□□□□□ -1.87
CD74P04233 YY1P1-201ENST00000427625 668 ntBASIC3.36□□□□□ -1.87
CD74P04233 DNAJC19P7-201ENST00000428811 344 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.36□□□□□ -1.87
CD74P04233 AL031663.1-201ENST00000437445 219 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC083863.1-201ENST00000438811 231 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC114878.1-201ENST00000441166 358 ntBASIC3.36□□□□□ -1.87
CD74P04233 Z99127.2-201ENST00000441426 334 ntBASIC3.36□□□□□ -1.87
CD74P04233 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.36□□□□□ -1.87
CD74P04233 PHBP16-201ENST00000446318 950 ntBASIC3.36□□□□□ -1.87
CD74P04233 AL157827.1-201ENST00000447622 132 ntBASIC3.36□□□□□ -1.87
CD74P04233 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.36□□□□□ -1.87
CD74P04233 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.36□□□□□ -1.87
CD74P04233 HMGB3P30-201ENST00000457863 606 ntBASIC3.36□□□□□ -1.87
CD74P04233 RPS20P4-201ENST00000461659 355 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC021146.7-201ENST00000509604 775 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.36□□□□□ -1.87
CD74P04233 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CD74P04233 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.36□□□□□ -1.87
CD74P04233 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.36□□□□□ -1.87
CD74P04233 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.36□□□□□ -1.87
CD74P04233 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.36□□□□□ -1.87
CD74P04233 TRAV8-5-201ENST00000537369 341 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.36□□□□□ -1.87
CD74P04233 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.36□□□□□ -1.87
CD74P04233 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.36□□□□□ -1.87
CD74P04233 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.36□□□□□ -1.87
CD74P04233 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.36□□□□□ -1.87
CD74P04233 AC068790.4-201ENST00000602474 263 ntBASIC3.36□□□□□ -1.87
CD74P04233 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.36□□□□□ -1.87
CD74P04233 AC105429.2-201ENST00000610567 517 ntBASIC3.36□□□□□ -1.87
CD74P04233 CR392039.4-201ENST00000624968 501 ntBASIC3.36□□□□□ -1.87
CD74P04233 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CD74P04233 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CD74P04233 AL158163.1-201ENST00000603915 1649 ntBASIC3.36□□□□□ -1.87
CD74P04233 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.36□□□□□ -1.87
CD74P04233 DHX40P1-201ENST00000588725 1412 ntBASIC3.36□□□□□ -1.87
CD74P04233 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.35□□□□□ -1.87
CD74P04233 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.35□□□□□ -1.87
CD74P04233 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CD74P04233 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.35□□□□□ -1.87
CD74P04233 AL512504.1-201ENST00000415494 778 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CD74P04233 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.35□□□□□ -1.87
CD74P04233 AL159169.1-201ENST00000421119 127 ntBASIC3.35□□□□□ -1.87
CD74P04233 OR5AW1P-201ENST00000426334 1006 ntBASIC3.35□□□□□ -1.87
CD74P04233 AC017083.1-201ENST00000428093 483 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms