Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PCDH1Q08174 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PCDH1Q08174 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
PCDH1Q08174 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC140479.2-201ENST00000421567 3130 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 MTND4P27-201ENST00000450813 1354 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCDH1Q08174 RN7SKP186-201ENST00000365371 303 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 RNA5SP77-201ENST00000365394 120 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 SNORA64.3-201ENST00000365647 134 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PCDH1Q08174 RNU6-510P-201ENST00000391239 108 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC087752.1-201ENST00000391360 558 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 HMGB3P7-201ENST00000400214 611 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AL078604.1-201ENST00000404609 466 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 TXNP7-201ENST00000406296 293 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC078974.1-201ENST00000411597 223 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 OSTCP4-201ENST00000424397 449 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AL627308.1-201ENST00000435693 821 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 RPL36AP15-201ENST00000444514 266 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC090453.1-201ENST00000495560 436 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 GAPDHP56-201ENST00000506031 988 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDH1Q08174 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC090958.1-201ENST00000511122 351 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 SNORD60.2-201ENST00000516883 86 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 NPM1P42-201ENST00000560329 862 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC007494.1-201ENST00000562293 760 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC005668.1-201ENST00000571142 476 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 LARP7P2-201ENST00000575306 125 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC020916.2-201ENST00000591242 360 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC113139.1-201ENST00000605049 239 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.97□□□□□ -1.45
PCDH1Q08174 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
PCDH1Q08174 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.97□□□□□ -1.45
PCDH1Q08174 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 GTF2IP4-201ENST00000453092 2054 ntBASIC5.97□□□□□ -1.45
PCDH1Q08174 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PCDH1Q08174 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
PCDH1Q08174 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
PCDH1Q08174 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.96□□□□□ -1.45
PCDH1Q08174 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 Y_RNA.132-201ENST00000363421 102 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 RNU4-1-201ENST00000363925 141 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PCDH1Q08174 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 MIR137-201ENST00000385223 102 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AL031679.1-201ENST00000400616 525 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 RPL23AP17-201ENST00000401064 499 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 RNU2-9P-201ENST00000410194 145 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC048351.1-201ENST00000420064 602 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 FAM183DP-201ENST00000421987 399 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 SETP9-201ENST00000423837 832 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.96□□□□□ -1.46
PCDH1Q08174 MTCO3P21-201ENST00000430791 643 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC024082.2-201ENST00000434771 238 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 BX679664.2-201ENST00000439282 283 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
PCDH1Q08174 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.96□□□□□ -1.46
PCDH1Q08174 RPS20P32-201ENST00000456044 356 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 RN7SL836P-201ENST00000476140 296 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 RN7SL741P-201ENST00000482473 289 ntBASIC5.96□□□□□ -1.46
PCDH1Q08174 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms