Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.55■□□□□ 0.24
H2afb2S4R1M3 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2afb2S4R1M3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Gm44450-201ENSMUST00000199528 114 ntBASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
H2afb2S4R1M3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
H2afb2S4R1M3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb2S4R1M3 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb2S4R1M3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
H2afb2S4R1M3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
H2afb2S4R1M3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Gm6433-201ENSMUST00000118634 875 ntBASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
H2afb2S4R1M3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms