Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
H2afb3S4R1G7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Gm8520-201ENSMUST00000186517 868 ntBASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
H2afb3S4R1G7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afb3S4R1G7 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.86□□□□□ -0.03
H2afb3S4R1G7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.85□□□□□ -0.03
H2afb3S4R1G7 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afb3S4R1G7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms