Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hdac6Q9Z2V5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Gm24513-201ENSMUST00000174964 138 ntBASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Gm27397-201ENSMUST00000184997 107 ntBASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 AC090659.1-201ENSMUST00000224334 768 ntBASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hdac6Q9Z2V5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Gm7222-201ENSMUST00000117512 906 ntBASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Gm25406-201ENSMUST00000157599 105 ntBASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Gm36967-201ENSMUST00000193814 266 ntBASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hdac6Q9Z2V5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hdac6Q9Z2V5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Gm45683-201ENSMUST00000210825 1247 ntBASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Hdac6Q9Z2V5 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Gm14822-201ENSMUST00000122247 291 ntBASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hdac6Q9Z2V5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac6Q9Z2V5 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac6Q9Z2V5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hdac6Q9Z2V5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hdac6Q9Z2V5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms