Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smarcb1Q9Z0H3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gm15165-201ENSMUST00000118140 502 ntBASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gm28659-201ENSMUST00000188013 759 ntBASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Smarcb1Q9Z0H3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Gm12644-201ENSMUST00000119935 606 ntBASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Gm36967-201ENSMUST00000193814 266 ntBASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Smarcb1Q9Z0H3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Smarcb1Q9Z0H3 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcb1Q9Z0H3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcb1Q9Z0H3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcb1Q9Z0H3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Smarcb1Q9Z0H3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Mir8098-201ENSMUST00000184011 137 ntBASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 AC164629.2-201ENSMUST00000217916 270 ntBASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Smarcb1Q9Z0H3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.07■□□□□ 0.32
Smarcb1Q9Z0H3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms