Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn8aQ9WTU3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Gm25406-201ENSMUST00000157599 105 ntBASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.59■□□□□ 0.25
Scn8aQ9WTU3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Birc2-201ENSMUST00000054878 378 ntBASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Scn8aQ9WTU3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn8aQ9WTU3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Scn8aQ9WTU3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn8aQ9WTU3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn8aQ9WTU3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms