Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cdh17Q9R100 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Phf7-203ENSMUST00000226565 1971 ntBASIC16.12■□□□□ 0.17
Cdh17Q9R100 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdh17Q9R100 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.11■□□□□ 0.17
Cdh17Q9R100 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.11■□□□□ 0.17
Cdh17Q9R100 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdh17Q9R100 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.1■□□□□ 0.17
Cdh17Q9R100 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.1■□□□□ 0.17
Cdh17Q9R100 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.1■□□□□ 0.17
Cdh17Q9R100 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Gm10812-201ENSMUST00000099864 546 ntBASIC16.1■□□□□ 0.17
Cdh17Q9R100 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdh17Q9R100 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.09■□□□□ 0.17
Cdh17Q9R100 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.09■□□□□ 0.17
Cdh17Q9R100 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Gm7370-201ENSMUST00000219471 767 ntBASIC16.09■□□□□ 0.17
Cdh17Q9R100 Gm18115-201ENSMUST00000221209 621 ntBASIC16.09■□□□□ 0.17
Cdh17Q9R100 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cdh17Q9R100 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms