Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Nr2e3Q9QXZ7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nr2e3Q9QXZ7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Gm11950-201ENSMUST00000121615 838 ntBASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nr2e3Q9QXZ7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nr2e3Q9QXZ7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nr2e3Q9QXZ7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nr2e3Q9QXZ7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Nr2e3Q9QXZ7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 84.2 ms