Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Shroom3Q9QXN0 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Shroom3Q9QXN0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Gm44771-201ENSMUST00000206975 626 ntBASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shroom3Q9QXN0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shroom3Q9QXN0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Shroom3Q9QXN0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom3Q9QXN0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom3Q9QXN0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom3Q9QXN0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shroom3Q9QXN0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.51■□□□□ 0.23
Shroom3Q9QXN0 Gm34391-201ENSMUST00000203706 907 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms