Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rfx5Q9JL61 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rfx5Q9JL61 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rfx5Q9JL61 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Gm21362-201ENSMUST00000194272 928 ntBASIC17.45■□□□□ 0.38
Rfx5Q9JL61 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rfx5Q9JL61 Haglr-201ENSMUST00000100000 2085 ntBASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Gm7367-201ENSMUST00000057611 492 ntBASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx5Q9JL61 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx5Q9JL61 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Gm44430-201ENSMUST00000203376 995 ntBASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rfx5Q9JL61 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx5Q9JL61 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms