Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfrsf13bQ9ET35 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Gm43183-201ENSMUST00000200632 547 ntBASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tnfrsf13bQ9ET35 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Gm9731-201ENSMUST00000209480 747 ntBASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tnfrsf13bQ9ET35 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Prob1-201ENSMUST00000097619 3021 ntBASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Tnfrsf13bQ9ET35 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tnfrsf13bQ9ET35 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tnfrsf13bQ9ET35 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms