Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44357-201ENSMUST00000195897 142 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm19658-201ENSMUST00000196231 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44367-201ENSMUST00000196836 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44350-201ENSMUST00000197197 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44390-201ENSMUST00000197533 144 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44313-201ENSMUST00000198018 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44486-201ENSMUST00000198508 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44314-201ENSMUST00000199263 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44394-201ENSMUST00000199558 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44484-201ENSMUST00000199873 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44466-201ENSMUST00000200264 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm44359-201ENSMUST00000200671 138 ntBASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rrp8Q9DB85 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rrp8Q9DB85 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rrp8Q9DB85 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rrp8Q9DB85 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rrp8Q9DB85 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms