Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.8■□□□□ 0.92
Chmp4bQ9D8B3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Gm11336-201ENSMUST00000118168 334 ntBASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Mir6982-201ENSMUST00000184354 68 ntBASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp4bQ9D8B3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Gm15565-201ENSMUST00000118890 427 ntBASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Gm27389-201ENSMUST00000183622 195 ntBASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Chmp4bQ9D8B3 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Gm18421-201ENSMUST00000204122 625 ntBASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp4bQ9D8B3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Chmp4bQ9D8B3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chmp4bQ9D8B3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chmp4bQ9D8B3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp4bQ9D8B3 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms