Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
U2af1Q9D883 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2af1Q9D883 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2af1Q9D883 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2af1Q9D883 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2af1Q9D883 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.73■■□□□ 1.07
U2af1Q9D883 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2af1Q9D883 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
U2af1Q9D883 Mir3081-201ENSMUST00000175305 84 ntBASIC21.73■■□□□ 1.07
U2af1Q9D883 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2af1Q9D883 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
U2af1Q9D883 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2af1Q9D883 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2af1Q9D883 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
U2af1Q9D883 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
U2af1Q9D883 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC21.72■■□□□ 1.07
U2af1Q9D883 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
U2af1Q9D883 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
U2af1Q9D883 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
U2af1Q9D883 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.72■■□□□ 1.07
U2af1Q9D883 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC21.71■■□□□ 1.07
U2af1Q9D883 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC21.71■■□□□ 1.07
U2af1Q9D883 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
U2af1Q9D883 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
U2af1Q9D883 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
U2af1Q9D883 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
U2af1Q9D883 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
U2af1Q9D883 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
U2af1Q9D883 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
U2af1Q9D883 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
U2af1Q9D883 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
U2af1Q9D883 Gm27357-201ENSMUST00000183754 135 ntBASIC21.7■■□□□ 1.06
U2af1Q9D883 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
U2af1Q9D883 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
U2af1Q9D883 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
U2af1Q9D883 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
U2af1Q9D883 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.69■■□□□ 1.06
U2af1Q9D883 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.69■■□□□ 1.06
U2af1Q9D883 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
U2af1Q9D883 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
U2af1Q9D883 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.69■■□□□ 1.06
U2af1Q9D883 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC21.69■■□□□ 1.06
U2af1Q9D883 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
U2af1Q9D883 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
U2af1Q9D883 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
U2af1Q9D883 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
U2af1Q9D883 Gm28033-201ENSMUST00000184224 96 ntBASIC21.68■■□□□ 1.06
U2af1Q9D883 Gm18669-201ENSMUST00000216049 778 ntBASIC21.68■■□□□ 1.06
U2af1Q9D883 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms