Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Chmp5Q9D7S9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.72■□□□□ 0.91
Chmp5Q9D7S9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Trmt13-210ENSMUST00000198454 880 ntBASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp5Q9D7S9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Gm7638-201ENSMUST00000121348 967 ntBASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp5Q9D7S9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Gm12085-201ENSMUST00000119263 940 ntBASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp5Q9D7S9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Gm12527-201ENSMUST00000117967 564 ntBASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp5Q9D7S9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp5Q9D7S9 Gm5643-201ENSMUST00000117081 966 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms