Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Stag1Q9D3E6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Gm6443-201ENSMUST00000203599 874 ntBASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Stag1Q9D3E6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Stag1Q9D3E6 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.64■□□□□ 0.74
Stag1Q9D3E6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Stag1Q9D3E6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Stag1Q9D3E6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Rps4l-201ENSMUST00000071745 943 ntBASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Stag1Q9D3E6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Gm43514-201ENSMUST00000198852 424 ntBASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Gm18195-201ENSMUST00000207604 706 ntBASIC19.62■□□□□ 0.73
Stag1Q9D3E6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.62■□□□□ 0.73
Stag1Q9D3E6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Stag1Q9D3E6 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms