Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.42■□□□□ 0.7
Rufy3Q9D394 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rufy3Q9D394 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy3Q9D394 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy3Q9D394 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy3Q9D394 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy3Q9D394 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.42■□□□□ 0.7
Rufy3Q9D394 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC19.41■□□□□ 0.7
Rufy3Q9D394 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Gm13559-201ENSMUST00000120476 863 ntBASIC19.4■□□□□ 0.7
Rufy3Q9D394 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Gm2274-201ENSMUST00000184539 609 ntBASIC19.4■□□□□ 0.7
Rufy3Q9D394 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy3Q9D394 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rufy3Q9D394 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rufy3Q9D394 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rufy3Q9D394 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rufy3Q9D394 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Gm16061-201ENSMUST00000122167 857 ntBASIC19.38■□□□□ 0.69
Rufy3Q9D394 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Gm18115-201ENSMUST00000221209 621 ntBASIC19.38■□□□□ 0.69
Rufy3Q9D394 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.38■□□□□ 0.69
Rufy3Q9D394 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy3Q9D394 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 AC115863.1-201ENSMUST00000214815 1813 ntBASIC19.37■□□□□ 0.69
Rufy3Q9D394 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.37■□□□□ 0.69
Rufy3Q9D394 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rufy3Q9D394 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.37■□□□□ 0.69
Rufy3Q9D394 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.37■□□□□ 0.69
Rufy3Q9D394 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms