Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.7■□□□□ 0.1
Upk1aQ9D132 Trmt13-210ENSMUST00000198454 880 ntBASIC15.7■□□□□ 0.1
Upk1aQ9D132 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Upk1aQ9D132 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Upk1aQ9D132 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Asic1-205ENSMUST00000228185 1818 ntBASIC15.68■□□□□ 0.1
Upk1aQ9D132 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.68■□□□□ 0.1
Upk1aQ9D132 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Upk1aQ9D132 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Upk1aQ9D132 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms