Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt2Q9CZN7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.82■□□□□ 0.12
Shmt2Q9CZN7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Shmt2Q9CZN7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Shmt2Q9CZN7 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Shmt2Q9CZN7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Gm11539-201ENSMUST00000119837 557 ntBASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Gm13436-201ENSMUST00000120418 567 ntBASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Shmt2Q9CZN7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Gm13559-201ENSMUST00000120476 863 ntBASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Gm43799-201ENSMUST00000201845 579 ntBASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Gm7791-201ENSMUST00000219066 539 ntBASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Shmt2Q9CZN7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shmt2Q9CZN7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Shmt2Q9CZN7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms