Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Chd1lQ9CXF7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chd1lQ9CXF7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Gm10849-201ENSMUST00000100397 618 ntBASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Chd1lQ9CXF7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Gm24841-201ENSMUST00000158676 357 ntBASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chd1lQ9CXF7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chd1lQ9CXF7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Gm37812-201ENSMUST00000195216 2475 ntBASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Dio3-201ENSMUST00000097228 1449 ntBASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Chd1lQ9CXF7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms