Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Gm3375-201ENSMUST00000203929 796 ntBASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Dancr-204ENSMUST00000132389 2347 ntBASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Rnf135Q9CWS1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Gm18958-201ENSMUST00000174258 762 ntBASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rnf135Q9CWS1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rnf135Q9CWS1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rnf135Q9CWS1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rnf135Q9CWS1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Rnf135Q9CWS1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Gm6659-201ENSMUST00000174752 547 ntBASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Gm7367-201ENSMUST00000057611 492 ntBASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rnf135Q9CWS1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms