Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrc40Q9CRC8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lrrc40Q9CRC8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Phf7-203ENSMUST00000226565 1971 ntBASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.44■□□□□ 0.22
Lrrc40Q9CRC8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Lrrc40Q9CRC8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Gm13436-201ENSMUST00000120418 567 ntBASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Lrrc40Q9CRC8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Lrrc40Q9CRC8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrc40Q9CRC8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.4■□□□□ 0.22
Lrrc40Q9CRC8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrc40Q9CRC8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lrrc40Q9CRC8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms