Protein–RNA interactions for Protein: Q9CPZ1

Ccdc198, Uncharacterized protein CCDC198, mousemouse

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc198Q9CPZ1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc198Q9CPZ1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc198Q9CPZ1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccdc198Q9CPZ1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.83□□□□□ -0.2
Ccdc198Q9CPZ1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccdc198Q9CPZ1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Gm24841-201ENSMUST00000158676 357 ntBASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Gm37025-201ENSMUST00000195159 829 ntBASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Gm9987-201ENSMUST00000069768 567 ntBASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ccdc198Q9CPZ1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Gm11539-201ENSMUST00000119837 557 ntBASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Gm13436-201ENSMUST00000120418 567 ntBASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccdc198Q9CPZ1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Gm13559-201ENSMUST00000120476 863 ntBASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc198Q9CPZ1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc198Q9CPZ1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms