Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh15Q99PJ1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh15Q99PJ1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdh15Q99PJ1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Gm43125-201ENSMUST00000201724 730 ntBASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pcdh15Q99PJ1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Gm37153-201ENSMUST00000193637 231 ntBASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.66■□□□□ 0.58
Pcdh15Q99PJ1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh15Q99PJ1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh15Q99PJ1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh15Q99PJ1 Gm43438-201ENSMUST00000198133 379 ntBASIC18.65■□□□□ 0.58
Pcdh15Q99PJ1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh15Q99PJ1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms