Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cntnap4Q99P47 Gm27525-201ENSMUST00000184465 107 ntBASIC17.7■□□□□ 0.42
Cntnap4Q99P47 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.7■□□□□ 0.42
Cntnap4Q99P47 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cntnap4Q99P47 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cntnap4Q99P47 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.7■□□□□ 0.42
Cntnap4Q99P47 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cntnap4Q99P47 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cntnap4Q99P47 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Gm34391-201ENSMUST00000203706 907 ntBASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.68■□□□□ 0.42
Cntnap4Q99P47 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cntnap4Q99P47 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Gm5864-201ENSMUST00000202263 970 ntBASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cntnap4Q99P47 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cntnap4Q99P47 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms