Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh4Q99MT2 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Msh4Q99MT2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.12■□□□□ 0.17
Msh4Q99MT2 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.12■□□□□ 0.17
Msh4Q99MT2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Msh4Q99MT2 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Msh4Q99MT2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Gm10013-201ENSMUST00000106074 672 ntBASIC16.11■□□□□ 0.17
Msh4Q99MT2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.11■□□□□ 0.17
Msh4Q99MT2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Msh4Q99MT2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Msh4Q99MT2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.1■□□□□ 0.17
Msh4Q99MT2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Gm18101-201ENSMUST00000215769 548 ntBASIC16.1■□□□□ 0.17
Msh4Q99MT2 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.1■□□□□ 0.17
Msh4Q99MT2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Msh4Q99MT2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh4Q99MT2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Gm6659-201ENSMUST00000174752 547 ntBASIC16.09■□□□□ 0.17
Msh4Q99MT2 Gm22697-201ENSMUST00000175194 63 ntBASIC16.09■□□□□ 0.17
Msh4Q99MT2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.09■□□□□ 0.17
Msh4Q99MT2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Msh4Q99MT2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Msh4Q99MT2 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh4Q99MT2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh4Q99MT2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Msh4Q99MT2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Msh4Q99MT2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Msh4Q99MT2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh4Q99MT2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
Msh4Q99MT2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh4Q99MT2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh4Q99MT2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Msh4Q99MT2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Msh4Q99MT2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Msh4Q99MT2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms