Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.47□□□□□ -0.09
Scrt1Q99M85 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Scrt1Q99M85 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.46□□□□□ -0.09
Scrt1Q99M85 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Scrt1Q99M85 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Scrt1Q99M85 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Scrt1Q99M85 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.45□□□□□ -0.1
Scrt1Q99M85 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.45□□□□□ -0.1
Scrt1Q99M85 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.45□□□□□ -0.1
Scrt1Q99M85 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Scrt1Q99M85 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Gm11594-201ENSMUST00000122313 162 ntBASIC14.44□□□□□ -0.1
Scrt1Q99M85 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Scrt1Q99M85 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Gm2651-201ENSMUST00000203560 838 ntBASIC14.44□□□□□ -0.1
Scrt1Q99M85 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Gm18195-201ENSMUST00000207604 706 ntBASIC14.44□□□□□ -0.1
Scrt1Q99M85 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.44□□□□□ -0.1
Scrt1Q99M85 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms