Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Gm10602-201ENSMUST00000098239 609 ntBASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cttnbp2nlQ99LJ0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Gm12933-201ENSMUST00000120203 872 ntBASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Gm18025-201ENSMUST00000221733 862 ntBASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.77■□□□□ 0.28
Cttnbp2nlQ99LJ0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cttnbp2nlQ99LJ0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cttnbp2nlQ99LJ0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cttnbp2nlQ99LJ0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Cttnbp2nlQ99LJ0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cttnbp2nlQ99LJ0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cttnbp2nlQ99LJ0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Gm13158-201ENSMUST00000122007 736 ntBASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cttnbp2nlQ99LJ0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cttnbp2nlQ99LJ0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms