Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cstf1Q99LC2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Psmb5-202ENSMUST00000227257 622 ntBASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cstf1Q99LC2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cstf1Q99LC2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gm23935-201ENSMUST00000102303 57 ntBASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gm24270-201ENSMUST00000102326 57 ntBASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gm24245-201ENSMUST00000157318 57 ntBASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cstf1Q99LC2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cstf1Q99LC2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cstf1Q99LC2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cstf1Q99LC2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.46■□□□□ 0.22
Cstf1Q99LC2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cstf1Q99LC2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cstf1Q99LC2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.45■□□□□ 0.22
Cstf1Q99LC2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cstf1Q99LC2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms