Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smarcd2Q99JR8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smarcd2Q99JR8 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Mir5126-201ENSMUST00000175513 77 ntBASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gm4535-201ENSMUST00000182274 558 ntBASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gm7506-201ENSMUST00000207758 815 ntBASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gm10355-201ENSMUST00000097146 517 ntBASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcd2Q99JR8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Gm25990-201ENSMUST00000102440 86 ntBASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcd2Q99JR8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Gm13418-201ENSMUST00000119097 944 ntBASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Gm8000-201ENSMUST00000188378 592 ntBASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Gm5364-201ENSMUST00000216789 889 ntBASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarcd2Q99JR8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms