Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdha11Q91Y19 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdha11Q91Y19 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdha11Q91Y19 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Gm27742-201ENSMUST00000184667 60 ntBASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Ank2-226ENSMUST00000189368 339 ntBASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdha11Q91Y19 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.35■□□□□ 0.37
Pcdha11Q91Y19 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdha11Q91Y19 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms