Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb5Q91XZ5 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Gm25745-201ENSMUST00000174945 133 ntBASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb5Q91XZ5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 AC127349.1-201ENSMUST00000224590 266 ntBASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb5Q91XZ5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Gm18206-201ENSMUST00000207027 926 ntBASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Pcdhb5Q91XZ5 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhb5Q91XZ5 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb5Q91XZ5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms