Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhga4Q91XY4 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhga4Q91XY4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 AA414768-201ENSMUST00000121924 1257 ntBASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Gm23634-201ENSMUST00000175071 91 ntBASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Gm21559-201ENSMUST00000220638 855 ntBASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Gm8587-201ENSMUST00000076538 843 ntBASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga4Q91XY4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga4Q91XY4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga4Q91XY4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga4Q91XY4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms