Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ddx41Q91VN6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Mir770-201ENSMUST00000103252 94 ntBASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Ddx41Q91VN6 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ddx41Q91VN6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Gm6623-201ENSMUST00000173570 544 ntBASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Gm27000-201ENSMUST00000182943 842 ntBASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ddx41Q91VN6 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Gm17807-201ENSMUST00000186869 298 ntBASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ddx41Q91VN6 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ddx41Q91VN6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms